Spatial versus spatio-temporal approaches for studying metacommunities: a multi-taxon analysis in Mediterranean and tropical temporary ponds.

Prior research on metacommunities has largely focused on snapshot surveys, often overlooking temporal dynamics. In this study, our aim was to compare the insights obtained from metacommunity analyses based on a spatial approach repeated over time, with a spatio-temporal approach that consolidates all data into a single model. We empirically assessed the influence of temporal variation in the environment and spatial connectivity on the structure of metacommunities in tropical and Mediterranean temporary ponds. Employing a standardized methodology across both regions, we surveyed multiple freshwater taxa in three time periods within the same hydrological year from multiple temporary ponds in each region. To evaluate how environmental, spatial and temporal influences vary between the two approaches, we used nonlinear variation partitioning analyses based on generalized additive models. Overall, this study underscores the importance of adopting spatio-temporal analytics to better understand the processes shaping metacommunities. While the spatial approach suggested that environmental factors had a greater influence, our spatio-temporal analysis revealed that spatial connectivity was the primary driver influencing metacommunity structure in both regions. Temporal effects were equally important as environmental effects, suggesting a significant role of ecological succession in metacommunity structure.

Amphibian diversity across three adjacent ecosystems in Área de Conservación Guanacaste, Costa Rica.

Amphibians are the most threatened species-rich vertebrate group, with species extinctions and population declines occurring globally, even in protected and seemingly pristine habitats. These 'enigmatic declines' are generated by climate change and infectious diseases. However, the consequences of these declines are undocumented as no baseline ecological data exists for most affected areas. Like other neotropical countries, Costa Rica, including Área de Conservación Guanacaste (ACG) in north-western Costa Rica, experienced rapid amphibian population declines and apparent extinctions during the past three decades. To delineate amphibian diversity patterns within ACG, a large-scale comparison of multiple sites and habitats was conducted. Distance and time constrained visual encounter surveys characterised species richness at five sites-Murciélago (dry forest), Santa Rosa (dry forest), Maritza (mid-elevation dry-rain forest intersect), San Gerardo (rainforest) and Cacao (cloud forest). Furthermore, species-richness patterns for Cacao were compared with historic data from 1987-8, before amphibians declined in the area. Rainforests had the highest species richness, with triple the species of their dry forest counterparts. A decline of 45% (20 to 11 species) in amphibian species richness was encountered when comparing historic and contemporary data for Cacao. Conservation efforts sometimes focus on increasing the resilience of protected areas, by increasing their range of ecosystems. In this sense ACG is unique containing many tropical ecosystems compressed in a small geographic space, all protected and recognised as a UNESCO world heritage site. It thus provides an extraordinary platform to understand changes, past and present, and the resilience of tropical ecosystems and assemblages, or lack thereof, to climate change.

Proteomic profile of the venom of three dark-colored Tityus (Scorpiones: Buthidae) from the tropical rainforests of Costa Rica.

OBJECTIVE: We aimed to elucidate the potential differences in the venom peptide sequences of three Tityus species from Costa Rican rainforests: T. jaimei, T. championi and T. dedoslargos, compared to T. cf. asthenes from Colombia, which could explain the low level of scorpionism in Costa Rica, evidenced by the lack of epidemiological data. METHODOLOGY: We applied venom proteomics of peptides purified by RP-HPLC and compared the obtained sequences from venoms of these Tityus species to the sequences previously identified from Tityus inhabiting other Central and South American regions. RESULTS: Venom proteome analysis evidences that most of the putative peptide toxins identified in Costa Rican dark-colored Tityus are very similar to those present in other T. (Atreus) from the region. CONCLUSIONS: Our study suggests that, in the case of potential envenomation by Tityus in Costa Rica, the same level of toxicity should be observed, compared to other cases caused by members of the subgenus from other geographical localities. On the other hand, compared to countries with more accelerated urban expansion, Costa Rican Tityus still inhabit secondary rainforests and do not commonly share the same spaces with humans, so the lack of epidemiological evidence of medical emergencies caused by envenoming by this scorpion group could be more related to ecological and demographic factors and less attributed to the characteristics of the venom.

Unveiling underestimated species diversity within the Central American Coralsnake, a medically important complex of venomous taxa.

Coralsnakes of the genus Micrurus are a diverse group of venomous snakes ranging from the southern United States to southern South America. Much uncertainty remains over the genus diversity, and understanding Micrurus systematics is of medical importance. In particular, the widespread Micrurus nigrocinctus spans from Mexico throughout Central America and into Colombia, with a number of described subspecies. This study provides new insights into the phylogenetic relationships within M. nigrocinctus by examining sequence data from a broad sampling of specimens from Mexico, Guatemala, Honduras, Nicaragua, Costa Rica, and Panama. The recovered phylogenetic relationships suggest that M. nigrocinctus is a species complex originating in the Pliocene and composed of at least three distinct species-level lineages. In addition, recovery of highly divergent clades supports the elevation of some currently recognized subspecies to the full species rank while others may require synonymization.

Sequence Divergence in Venom Genes Within and Between Montane Pitviper (Viperidae: Crotalinae: Cerrophidion) Species is Driven by Mutation-Drift Equilibrium.

Snake venom can vary both among and within species. While some groups of New World pitvipers-such as rattlesnakes-have been well studied, very little is known about the venom of montane pitvipers (Cerrophidion) found across the Mesoamerican highlands. Compared to most well-studied rattlesnakes, which are widely distributed, the isolated montane populations of Cerrophidion may facilitate unique evolutionary trajectories and venom differentiation. Here, we describe the venom gland transcriptomes for populations of C. petlalcalensis, C. tzotzilorum, and C. godmani from Mexico, and a single individual of C. sasai from Costa Rica. We explore gene expression variation in Cerrophidion and sequence evolution of toxins within C. godmani specifically. Cerrophidion venom gland transcriptomes are composed primarily of snake venom metalloproteinases, phospholipase A[Formula: see text]s (PLA[Formula: see text]s), and snake venom serine proteases. Cerrophidion petlalcalensis shows little intraspecific variation; however, C. godmani and C. tzotzilorum differ significantly between geographically isolated populations. Interestingly, intraspecific variation was mostly attributed to expression variation as we did not detect signals of selection within C. godmani toxins. Additionally, we found PLA[Formula: see text]-like myotoxins in all species except C. petlalcalensis, and crotoxin-like PLA[Formula: see text]s in the southern population of C. godmani. Our results demonstrate significant intraspecific venom variation within C. godmani and C. tzotzilorum. The toxins of C. godmani show little evidence of directional selection where variation in toxin sequence is consistent with evolution under a model of mutation-drift equilibrium. Cerrophidion godmani individuals from the southern population may exhibit neurotoxic venom activity given the presence of crotoxin-like PLA[Formula: see text]s; however, further research is required to confirm this hypothesis.

RESUMEN: El veneno de las serpientes puede variar entre y dentro de las especies. Mientras algunos grupos de viperidos del Nuevo Mundo­como las cascabeles­han sido bien estudiadas, muy poco se sabe acerca del veneno de las nauyacas de frío (Cerrophidion) que se encuentran en las zonas altas de Mesoamérica. Comparadas con las extensamente estudiadas cascabeles, que estan ampliamente distribuidas, las poblaciones de Cerrophidion, aisladas en montañas, pueden poseer trayectorias evolutivas y diferenciación en su veneno unicos. En el presente trabajo, describimos el transcriptoma de las glándulas de veneno de poblaciones de C. petlalcalensis, C. tzotzilorum, y C. godmani de México, y un individuo de C. sasai de Costa Rica. Exploramos la variación en la expresión de toxinas en Cerrophidion y la evolución en las secuencias geneticas en C. godmani específicamente. El transcriptoma de la glándula de veneno de Cerrophidion esta compuesto principalmente de Metaloproteinasas de Veneno de Serpiente, Fosfolipasas A[Formula: see text] (PLA[Formula: see text]s), y Serin Proteasas de Veneno de Serpiente. Cerrophidion petlalcalensis presenta poca variación intraespecífica; sin embargo, los transcriptomas de la glandula de veneno de C. godmani y C. tzotzilorum difieren significativamente entre poblaciones geográficamente aisladas. Curiosamente, la variación intraespecífica estuvo atribuida principalmente a la expresión de las toxinas ya que no encontramos señales de selección en las toxinas de C. godmani. Adicionalmente, encontramos miotoxinas similares a PLA[Formula: see text] en todas las especies excepto C. petlalcalensis, y PLA[Formula: see text]s similares a crotoxina en la población sureña de C. godmani. Nuestros resultados demuestran la presencia de variacion intraespecífica presente en el veneno de C. godmani y C. tzotzilorum. Las toxinas de Cerrophidion godmani muestran poca evidencia de selección direccional, y la variación en la secuencias de las toxinas es consistente con evolucion bajo un modelo de equilibrio de mutación-deriva. Algunos individuos de C. godmani de la población del sur potencialmente tienen un veneno neurotóxico dada la presencia de PLA[Formula: see text]s similares a la crotoxina, sin embargo, se necesita más evidencia para corroborar esta hipótesis.

Inconsistent response of taxonomic groups to space and environment in mediterranean and tropical pond metacommunities.

The metacommunity concept provides a theoretical framework that aims at explaining organism distributions by a combination of environmental filtering, dispersal, and drift. However, few works have attempted a multitaxon approach and even fewer have compared two distant biogeographical regions using the same methodology. We tested the expectation that temperate (mediterranean-climate) pond metacommunities would be more influenced by environmental and spatial processes than tropical ones, because of stronger environmental gradients and a greater isolation of waterbodies. However, the pattern should be different among groups of organisms depending on their dispersal abilities. We surveyed 30 tropical and 32 mediterranean temporary ponds from Costa Rica and Spain, respectively, and obtained data on 49 environmental variables. We characterized the biological communities of bacteria and archaea (from the water column and the sediments), phytoplankton, zooplankton, benthic invertebrates, amphibians and birds, and estimated the relative role of space and environment on metacommunity organization for each group and region, by means of variation partitioning using generalized additive models. Purely environmental effects were important in both tropical and mediterranean ponds, but stronger in the latter, probably due to their larger limnological heterogeneity. Spatially correlated environment and pure spatial effects were greater in the tropics, related to higher climatic heterogeneity and dispersal processes (e.g., restriction, surplus) acting at different scales. The variability between taxonomic groups in the contribution of spatial and environmental factors to metacommunity variation was very wide, but higher in active, compared with passive, dispersers. Higher environmental effects were observed in mediterranean passive dispersers, and higher spatial effects in tropical passive dispersers. The unexplained variation was larger in the tropical setting, suggesting a higher role for stochastic processes, unmeasured environmental factors, or biotic interactions in the tropics, although this difference affected some actively dispersing groups (insects and birds) more than passive dispersers. These results, despite our limitations in comparing only two regions, provide support, for a wide variety of aquatic organisms, for the classic view of stronger abiotic niche constraints in temperate areas compared with the tropics. The heterogeneous response of taxonomic groups between regions also points to a stronger influence of regional context than organism adaptations on metacommunity organization.

Half a century of research on Bothrops asper venom variation: biological and biomedical implications.

Snake venoms are a complex biological mixture of proteins with or without enzymatic activity, peptides, and nucleotides, among other components. It is produced in specialized secretory glands located in the maxillary region, being the result of millions of years of evolution and whose biological functions are defense, immobilization, and digestion of prey. Venoms present intraspecific (i.e., individual, ontogenetic, geographical) and interspecific (i.e., between sympatric and allopatric species) variation, and the study of this variability has become the focus of toxinological research. Bothrops asper is responsible for highest incidence, morbimortality and severe cases of envenoming in Mesoamerica and northern South America. Given its clinical importance, its venom has been characterized and compared qualitatively and quantitatively across the species range. More than 50 years of research show that B. asper venom is endowed with an interesting intraspecific variability. Knowing this variation has allowed advances in the elucidation of the biological role of the venom, a better understanding of the clinical signs and symptoms in patients envenomed by B asper, the immunological implications in the context of antivenoms production, and the generation of new ideas that could be useful to solve different biological and evolutionary questions of one of the venomous snakes with the greatest distribution and strongest public health impact in Latin America.

Phylogenetic and morphological evidence reveals the association between diet and the evolution of the venom delivery system in Neotropical goo-eating snakes

Advanced endoglyptodont snakes share a complex but homologous venom delivery system associated with the upperjaw and its dentition. Recently, a remarkable novel lower jaw venom delivery system was described for the Neotropicaldipsadine radiation of goo-eating snakes. While most dipsadines are opistoglyphous and exhibit large, mainly serousvenom glands associated with the upper jaw and supralabial glands, goo-eating dipsadine snakes are aglyphous and lackserous upper labial venom glands. Here, we provide new morphological and histological information on the oral glandsand maxillary dentition of representatives of the major lineages of dipsadines that help trace the evolutionary steps thatshaped the venom delivery system of dipsadines. We performed a maximum likelihood analysis on a molecular datasetthat includes 443 terminals and seven loci. Our results show that goo-eating dipsadines form a monophyletic assemblagethat includes the genusAdelphicosfor the first time, along withGeophis,Atractus,Ninia,Chersodromus,Tropidodipsas,Sibon, andDipsas. We also provide the first evidence of a complete shift from an upper jaw to a lower jaw venomdelivery system associated with their specialized feeding behaviour. Unlike other dipsadines who exhibit typicalendoglyptodont anteroposteriorly ridged posterior maxillary teeth, goo-eating dipsadines have uniform lateromediallyridged teeth throughout their maxilla. Our results indicate that the loss of the endoglyptodont venom delivery systemoccurred in the most recent common ancestor of goo-eating dipsadines, probably resulting from the loss of theembryonic posterior maxillary lamina responsible for the development of the venom delivery system.

Bases conceptuales para la compensación ambiental bajo el enfoque ecológico

Introducción: La generación de impactos negativos producto de proyectos de infraestructura o actividades de desarrollo generan pérdida de biodiversidad y reducción de la calidad de los servicios que el ambiente provee a sociedades humanas. Afortunadamente, muchos de esos impactos pueden ser reducidos, controlados o resarcidos por medio de medidas de mitigación, rehabilitación y compensación, que suelen sustentarse en el marco jurídico ambiental de los países o estados donde son implementados. Esta revisión provee una visión teórica del uso de compensación ambiental como instrumento jurídico/técnico integrado al manejo del entorno natural. Metodología: Realizamos una revisión de la literatura global sobre el tema mediante los buscadores de referencias GoogleScholar y SciELO empleando varios indicadores en inglés y español. Resultados: Un total de 244 referencias sobre compensación ambiental fueron encontradas, catalogadas y evaluadas, mostrándose un claro patrón de incremento del número de ellas en la última década. La compensación ambiental constituye un instrumento jurídico/técnico que permite resarcir por pérdidas ambientales y suele ser un componente de los Estudios de Impacto Ambiental regulado por el estado. Varias estrategias metodológicas son empleadas para establecer acciones compensatorias, cada una de ellas sustentada en alguno de cuatro enfoques posibles: económico, ecológico, político y cultural/social. Dentro del enfoque ecológico, se busca la equivalencia ecológica entre los elementos ambientales impactados y la compensación, procurando que no exista pérdida neta. Así, este enfoque tiene la ventaja de posibilitar la incorporación de múltiples criterios para la evaluación del daño y de las acciones de indemnización, por lo que es posible de aplicar en situaciones diversas. A pesar de su uso, la aplicación de medidas compensatorias no está exenta de crítica y hay situaciones en que la singularidad de los elementos impactados imposibilita un resarcimiento efectivo de las pérdidas. Conclusiones: La compensación tiene gran relevancia actualmente en la gestión ambiental y debe favorecer el derecho universal a un ambiente sano. Sin embargo, su aplicación efectiva requiere claridad en los procedimientos seguidos y una muy estrecha vigilancia prevenir pérdidas o incluso una ganancia neta ambiental.

Introduction: Infrastructure projects or development activities often generate a loss of biodiversity and reduce the quality of the environment's services to human societies. Fortunately, many of these impacts can be reduced, controlled, or compensated through mitigation, rehabilitation, and compensation measures, which usually rely on the environmental legal framework of the countries or states where they are implemented. This review provides a theoretical vision of using environmental compensation as a legal/technical instrument integrated into natural environment management. Methodology: We reviewed the global literature on the subject using the GoogleScholar and SciELO reference search engines using various indicators in English and Spanish. Results: We found 244 references on environmental compensation, showing a clear increasing pattern in the last decade. Environmental compensation constitutes a legal/technical instrument that allows offsets for environmental losses and often is part of the Environmental Impact Studies regulated by the state. Several methodological strategies are used to establish compensatory actions, each of them based on one of four possible approaches: economic, ecological, political, and cultural. The ecological equivalence between the impacted environmental elements and compensation is sought within the ecological approach, ensuring no net loss. Thus, this approach allows the incorporation of multiple criteria for the evaluation of damage and compensation actions: it can be applied in different situations. Nevertheless, compensatory measures are not exempt from criticism. There are situations in which the singularity of the impacted elements makes an adequate compensation for losses impossible. Conclusions: Compensation is highly relevant in environmental management and must favor the universal right to a healthy environment. However, its practical application requires clear procedures and close vigilance to prevent losses or even a net environmental gain.

Compensación Ambiental en Costa Rica: Legislación y alcances

Introducción: La compensación ambiental es un instrumento técnico-jurídico de gestión ambiental utilizado para compensar el daño ambiental debido a los impactos irreversibles e inevitables de proyectos de desarrollo. Por lo general, las regulaciones de compensación se incluyen en la legislación ambiental nacional. Este artículo resume la legislación de compensación ambiental en Costa Rica, un país con una reconocida tradición de conservación y conciencia ambiental. Nuestro objetivo es describir cómo se formula la compensación en ese país e identificar posibles vacíos regulatorios. Métodos: Realizamos una revisión sistemática de la legislación ambiental a través del Sistema Costarricense de Información Jurídica (http://www.pgrweb.go.cr/scij/avanzada_pgr.aspx), considerando tanto normativa como pronunciamientos sobre medidas de compensación y mitigación. Resultados: La Constitución Política de Costa Rica reconoce el medio ambiente sano como un derecho fundamental de todos los ciudadanos. Actualmente se encuentran en vigencia al menos siete leyes que tratan de temas ambientales y sus respectivos reglamentos. Esta voluminosa legislación tiene como objetivo proteger los recursos naturales regulando su uso y creando un conjunto de áreas silvestres protegidas. Sin embargo, la legislación es algo repetitiva y abierta a interpretación, lo que facilita la confusión. Las acciones que requieren compensación están reguladas de manera general, lo que dificulta establecer cuándo y cómo aplicarlas. Además, la compensación se considera en función de cuándo se identifica el daño y no debido a su nivel de impacto ambiental. Asimismo, la normativa no hace explícitos los principios y objetivos que sustentan las medidas compensatorias ni cómo deben llevarse a cabo, mencionando brevemente algunas acciones que no aseguran que la pérdida ambiental neta sea cero. Conclusiones: Esta revisión revela la necesidad de estandarizar los mecanismos para determinar las medidas compensatorias a nivel regulatorio, analizando además las estrategias que se seguirán para asegurar la proporcionalidad y la equivalencia ecológica. La legislación debe enfatizar la importancia de la compensación como práctica positiva, la cual debe ser incorporada dentro de los lineamientos del Estudio de Impacto Ambiental.

Introduction: Environmental compensation is a technical-legal instrument of environmental management used to offset damage due to non-reversible and unavoidable impacts. Usually, offset regulations are included in national environmental legislations. This paper summarizes environmental compensation legislation in Costa Rica, a country with a recognized conservation tradition and environmental awareness. Our goal is to describe how compensation is formulated in that country and identify possible regulations gaps. Methods: We carried out a systematic review of environmental legislation through the Costa Rican Legal Information System (http://www.pgrweb.go.cr/scij/avanzada_pgr.aspx), considering both regulations and pronouncements on compensation measures and mitigation. Results: The Political Constitution of Costa Rica recognizes a healthy environment as a fundamental right for all citizens. At least seven laws dealing with environmental issues and their respective regulations are currently enforced. This bulky legislation aims to protect natural resources by regulating their use and creating an assemblage of protected wild areas. However, the legislation is somewhat repetitive and open to interpretation, facilitating confusion. Actions requiring compensation are regulated in a general way, making it difficult to establish when and how to apply them. In addition, compensation is considered based on when the damage is identified and not on its level of environmental impact. Furthermore, the regulations do not make explicit the principles and goals that support the compensatory measures or how they should be carried out, briefly mentioning some actions that do not ensure that the net environmental loss is zero. Conclusions: This review reveals the need to standardize the mechanisms to determine compensatory measures at the regulatory level, also analyzing the strategies that will be followed to ensure proportionality and ecological equivalence. The legislation must emphasize the importance of compensation as a positive practice, which must be incorporated within the guidelines of the Environmental Impact Study.

Aplicación del Método Hectárea de Hábitat en compensación ambiental: El caso del Embalse Río Piedras, Costa Rica

Introducción: La compensación ambiental es la alternativa final para enfrentar los impactos de proyectos de desarrollo que no pueden ser evitados, reducidos o mitigados. La compensación de hábitats pretende sustituir recursos ecológicamente equivalentes. El Método Hectárea de Hábitat se diseñó inicialmente para evaluar la equivalencia ecológica de vegetación nativa y emplea puntajes de indicadores relativos a un hábitat de referencia. La suma de estos puntajes mide la condición estructural del ambiente de manera relativa a la referencia, cuantificando el número de hectáreas necesarias para compensar la pérdida de un hábitat similar. Aunque el método no está exento de limitaciones, los valores se pueden estimar a partir de datos de campo recogidos sin ambigüedad, de forma reproducible, con menos sesgos que métodos más cualitativos. En este artículo, usamos una modificación del Método Hectárea de Hábitat para determinar el área equivalente necesaria para compensar la pérdida de hábitat en un área silvestre protegida en Costa Rica. Metodología: Trabajamos en la Reserva Biológica Lomas de Barbudal, Pacífico norte de Costa Rica, un área silvestre protegida donde se inundarán cerca de 113 hectáreas para el Embalse de Río Piedras. En una propiedad previamente identificada como un sitio potencial de compensación, evaluamos indicadores de paisaje, suelo, estructura de la vegetación y servicios ecosistémicos; asignamos los puntajes en relación con el sitio a inundar. Resultados: El puntaje de la condición ambiental en el sitio de compensación fue de 44,7% (±15,9%) del sitio inundado. En consecuencia, considerando la incertidumbre de nuestras mediciones, compensar la pérdida de cada hectárea requeriría entre 2.23 y 3.49 hectáreas de un ambiente similar. Conclusión: Se necesitan entre 2.23 y 3.49 hectáreas de reemplazo, para compensar la pérdida de hábitat en el Embalse de Río Piedras.

Introduction: Environmental compensation is the final alternative to face the impacts of development projects that cannot be avoided, reduced, or mitigated. The offset of affected habitats or environmental elements usually substitutes ecologically equivalent resources. The Habitat-Hectare Method was initially designed to assess the ecological equivalence of native vegetation, and employs indicator scores relative to a reference habitat. The sum of these scores measures the structural condition of the environment against the reference, quantifying the number of hectares needed to compensate for the loss of similar habitat. Although it is not exempt from limitations, the values can be estimated from field data collected without ambiguity, in a reproducible way, with less bias than more qualitative methods. In this paper, we use a modification of the Habitat-Hectare Method to determine the equivalent area needed to compensate for habitat loss in a protected wilderness in Costa Rica. Methods: We worked in the Lomas de Barbudal Biological Reserve, north Pacific of Costa Rica, a protected wilderness where nearly 113 hectares will be flooded for the Río Piedras Reservoir. In a property previously identified as a potential compensation site, we assessed indicators for landscape, soil, vegetation structure, and ecosystem services; the scores were assigned in relation to the environment found at the flood site. Results: The environmental condition score at the compensation site was 44.7% (±15.9%) of the impact site. Consequently, considering the uncertainty in our measurements, compensating for the loss of each hectare would require between 2.23 and 3.49 hectares of a similar environment. Conclusion: Between 2.23 and 3.49 hectares of are needed to compensate for the loss of habitat in the Río Piedras Reservoir.

Uso de la diversidad biológica de grupos indicadores para evaluar la compensación ecológica: el caso del Embalse Río Piedras, Costa Rica

Introducción: Cerca de 113 hectáreas dentro de la Reserva Biológica Lomas de Barbudal (RBLB) se inundarían si se llegara a establecer el embalse de riego Río Piedras en el noroeste de Costa Rica. Ante ese impacto inevitable, la legislación costarricense requiere evaluar la pérdida de diversidad en el sitio y compensarla siguiendo el principio de equivalencia ecológica. Objetivo: Nuestro objetivo fue evaluar la pérdida de diversidad en el sitio y, valorar esta condición en una propiedad privada adyacente considerada como sitio potencial para compensar por esas pérdidas. Metodología: La diversidad, composición y prioridad de conservación de plantas vasculares, fauna vertebrada y artrópodos del sotobosque fueron evaluadas en el sitio de inundación en RBLB y en una propiedad privada adyacente identificada como sitio potencial de compensación. La equivalencia en diversidad entre ambos sitios se valoró mediante un procedimiento que asigna puntajes a los diferentes indicadores del sitio de compensación respecto a los observados en RBLB. La suma de esos puntajes representa la condición de diversidad del sitio de compensación y puede utilizarse como criterio para fundamentar acciones resarcitorias. Resultados: Todos los grupos sustitutos registraron un alto número de especies, aunque la información aportada por las plantas herbáceas, los mamíferos no voladores y los reptiles fue limitada. En contraste, los otros grupos indican una mayor diversidad en el sitio potencial de inundación, atribuida a sutiles diferencias ambientales y a su mejor conservación. En consecuencia, se valoró sustituir el área afectada por un área mayor del sitio de compensación para resarcir las perdidas en diversidad estimadas. Conclusión: Nuestro análisis muestra que grupos sustitutos pueden ser empleados en estudios ambientales a corto plazo. Sin embargo, los grupos a utilizar deben seleccionarse cuidadosamente, considerando los objetivos y el alcance del proyecto. Cuantificar la condición de diversidad del sitio de compensación respecto a la que se encuentra en un sitio de referencia parece ser un procedimiento válido, repetible y evaluable que permite establecer criterios sobre los cuales basar medidas resarcitorias.

Introduction: About 113 hectares within the Lomas de Barbudal Biological Reserve (RBLB) would be flooded if the Río Piedras irrigation reservoir were established in northwestern Costa Rica. Given this inevitable impact, Costa Rican legislation requires evaluating the loss of diversity in the site and compensating for it following the principle of ecological equivalence. Objetive: Our goal was to assess the loss of diversity at that site and evaluate the condition of an adjacent private property as a potential site to compensate for those losses. Methodology: The diversity, composition, and conservation priority of vascular plants, vertebrate fauna, and understory arthropods were assessed at the RBLB flood site and on an adjacent private property identified as a potential offset site. The equivalence in diversity between both sites was evaluated by assigning scores to the different indicators at the compensation site concerning those observed in RBLB. The sum of these scores represents the diversity condition of the compensation site and can be used as a criterion to support compensatory actions. Results: All surrogate groups recorded a high number of species, although the information provided by herbaceous plants, non-flying mammals, and reptiles was limited. In contrast, the other groups indicate a greater diversity in the potential flood site, attributed to subtle environmental differences and the better conservation at this site. Consequently, it was assessed to replace the affected area with a larger offset site area to compensate for the estimated losses in diversity. Conclusion: Our analysis shows that surrogate groups can be used in short-term environmental studies. However, the groups to be used must be carefully selected, considering the objectives and scope of the project. Quantifying the diversity condition of the compensation site concerning that found in a reference site seems to be a valid, repeatable, and evaluable procedure that allows establishing criteria on which to base compensatory measures.

Compensación ambiental por la segregación y uso de un área dentro de un refugio de vida silvestre: un caso de estudio empleando coste de oportunidad

Introducción: El establecimiento del Puesto Fronterizo Las Tablillas implica la segregación de 12.12 ha del Refugio Nacional de Vida Silvestre Corredor Fronterizo (RNVSCF), en el norte de Costa Rica. El sitio tiene una larga historia de uso de la tierra y su entorno natural está muy degradado. Este es un caso que se puede abordar desde el coste de oportunidad que se refiere al valor de la alternativa a la que se renuncia al tomar una decisión económica. Objetivo: En este artículo, usamos este precepto para evaluar la compensación por pérdidas en la estructura del hábitat y la biodiversidad si se interrumpiera la dinámica de sucesión dentro de un área silvestre protegida. Métodos: Para encontrar la ganancia neta en compensación requerida por dicha segregación, analizamos la diversidad y composición de la cubertura forestal cercana para pronosticar el ambiente que se perdería si se interrumpieran sus objetivos de conservación (costo de oportunidad). Compensar estas pérdidas requiere un ambiente equivalente, por lo que seleccionamos dos propiedades, entre 27 investigadas adyacentes al RNVSCF, que comparten cobertura forestal, están registradas legalmente y poseen atributos ambientales favorables para el diseño de reservas. Las dos propiedades seleccionadas y el sitio Las Tablillas fueron caracterizados a nivel de atributos geológicos e hidrológicos y de composición biológica de grupos indicadores. Resultados: Ambas propiedades son física y biológicamente favorables para el intercambio. La escogencia de cualquiera aumentaría el área del RNVSCF en más de 100 ha de un ambiente con mejor cobertura, más diversidad y mejor conexión con otras masas forestales que el observado en el sitio de segregación. Esto es una ventaja para el objetivo de conservación del refugio. Conclusión: En este caso, el coste de oportunidad favoreció la ganancia ambiental para la propuesta de compensación y podría ser utilizado para evaluar otras compensaciones que involucren ambientes sensibles o protegidos.

Introduction: The establishment of the Las Tablillas Border Post implies the segregation of 12.12 ha within the National Wildlife Refuge Border Corridor (RNVSCF) in northern Costa Rica. The site has a long land use history, so its environment is highly degraded. This case can be studied from the opportunity cost, which refers to the amount of the alternative given up when making an economic decision. Objective: In this paper, we use this precept to assess the compensation for losses in habitat structure and biodiversity if succession dynamics within a protected wilderness area were interrupted. Methods: To find the net gain in compensation required by this segregation, we analyzed the diversity and composition of nearby forest cover to forecast the environment that would be lost if its conservation objectives were interrupted (opportunity cost). Compensating for these losses requires an equivalent environment, so we selected two properties, among the 27 investigated, that shared forest cover, are located adjacent to the RNVSCF, are registered, and possess other attributes favorable to the design of reserves. The two selected properties and the Las Tablillas site were characterized at the level of geological and hydrological attributes and the composition of indicator groups. Results: Both properties are physically and biologically favorable for the exchange. It would increase the area of the RNVSCF by more than 100 ha of an environment with better coverage, more diversity, and a better connection to other forest masses than the one observed in the segregation site, which is an advantage to the conservation objective of the refuge. Conclusion: In this case, the opportunity cost favored the environmental gain for the offset proposal and could be used to evaluate other compensation involving sensitive or protected environments.

Proteomic and toxicological analysis of the venom of Micrurus yatesi and its neutralization by an antivenom.

Coralsnakes belong to the family Elapidae and possess venoms which are lethal to humans and can be grouped based on the predominance of either three finger toxins (3FTxs) or phospholipases A2 (PLA2s). A proteomic and toxicological analysis of the venom of the coralsnake Micrurus yatesi was performed. This species, distributed in southeastern Costa Rica, was formerly considered a subspecies of M. alleni. Results showed that this venom is PLA2-rich, in contrast with the previously studied venom of Micrurus alleni. Toxicological evaluation of the venom, in accordance with proteomic data, revealed that it has a markedly higher in vitro PLA2 activity upon a synthetic substrate than M. alleni. The evaluation of in vivo myotoxicity in CD-1 mice using histological evaluation and plasma creatine kinase release also showed that M. yatesi venom caused muscle damage. A commercial equine antivenom prepared using the venom of Micrurus nigrocinctus displayed a similar recognition of the venoms of M. yatesi and M. nigrocinctus by enzyme immunoassay. This antivenom also immunorecognized the main fractions of the venom of M. yatesi and was able to neutralize its lethal effect in a murine model.

Morphology and seasonality of the sexual segment of the kidney in genus Bothrops snakes.

In Squamata, the sexual segment of the male kidney (SSK) produces secretory granules that are transmitted to the female tract during copulation. Here, we investigate the morphology of SSK in various species of the pitviper-genus Bothrops, a medically relevant clade of Neotropical snakes, using histology, histochemistry, as well as scanning and transmission electron microscopy. We also evaluated the relationship of SSK hypertrophy with spermatogenesis and storage of sperm. The SSK in Bothrops consists of tall columnar epithelial cells filled with electron-dense secretory granules. These granules are apparently released into the lumen by an apocrine secretory process. In general, the ultrastructural morphology of SSK in Bothrops is similar to those described for other pitvipers in the genus Agkistrodon. In most Bothrops males, the SSK produces carbohydrates and proteins, and occurs in all lobes of the kidney, occupying most of the kidney mass. In contrast, intersexual females (with male copulatory organs) of Bothrops insularis had a smaller SSK diameter than males and did not show hypertrophy. The seasonal development of SSK in Bothrops species seems to be driven by environmental factors rather than phylogeny, since sister species exhibited periods of hypertrophy at different months. In most Bothrops males, hypertrophy occurs at various seasons of the year (spring, summer, autumn), even in winter, and seasonal changes in SSK do not necessarily accompany spermatogenesis.

Promoting co-existence between humans and venomous snakes through increasing the herpetological knowledge base.

Snakebite incidence at least partly depends on the biology of the snakes involved. However, studies of snake biology have been largely neglected in favour of anthropic factors, with the exception of taxonomy, which has been recognised for some decades to affect the design of antivenoms. Despite this, within-species venom variation and the unpredictability of the correlation with antivenom cross-reactivity has continued to be problematic. Meanwhile, other aspects of snake biology, including behaviour, spatial ecology and activity patterns, distribution, and population demography, which can contribute to snakebite mitigation and prevention, remain underfunded and understudied. Here, we review the literature relevant to these aspects of snakebite and illustrate how demographic, spatial, and behavioural studies can improve our understanding of why snakebites occur and provide evidence for prevention strategies. We identify the large gaps that remain to be filled and urge that, in the future, data and relevant metadata be shared openly via public data repositories so that studies can be properly replicated and data used in future meta-analyses.

Venomics of the poorly studied hognosed pitvipers Porthidium arcosae and Porthidium volcanicum.

We report the first proteomics analyses of the venoms of two poorly studied snakes, the Manabi hognosed pitviper Porthidium arcosae endemic to the western coastal province of Manabí (Ecuador), and the Costa Rican hognosed pitviper P. volcanicum with distribution restricted to South Pacific Costa Rica and western Panamá. These venom proteomes share a conserved compositional pattern reported in four other congeneric species within the clade of South American Porthidium species, P. nasutum, P. lansbergii, P. ophryomegas, and P. porrasi. The paraspecific immunorecognition profile of antivenoms produced in Costa Rica (ICP polyvalent), Perú (Instituto Nacional de Salud) and Brazil (soro antibotrópico pentavalente, SAB, from Instituto Butantan) against the venom of P. arcosae was investigated through a third-generation antivenomics approach. The maximal venom-binding capacities of the investigated antivenoms were 97.1 mg, 21.8 mg, and 25.7 mg of P. arcosae venom proteins per gram of SAB, ICP, and INS-PERU antibody molecules, respectively, which translate into 28.4 mg, 13.1 mg, and 15.2 mg of total venom proteins bound per vial of SAB, ICP, and INS-PERU AV. The antivenomics results suggest that 21.8%, 7.8% and 6.1% of the SAB, ICP, and INS-PERU antibody molecules recognized P. arcosae venom toxins. The SAB antivenom neutralized P. arcosae venom's lethality in mice with an ED50 of 31.3 mgV/g SAB AV. This preclinical neutralization paraspecificity points to Brazilian SAB as a promising candidate for the treatment of envenomings by Ecuadorian P. arcosae. BIOLOGICAL SIGNIFICANCE: Assessing the preclinical efficacy profile of antivenoms against homologous and heterologous medically relevant snake venoms represents an important goal towards defining the biogeographic range of their clinical utility. This is particularly relevant in regions, such as Mesoamerica, where a small number of pharmaceutical companies produce antivenoms against the venoms of a small number of species of maximum medical relevance among the local rich herpetofauna, leaving a wide range of snakes of secondary medical relevance, but also causing life-threatening human envenomings without nominal clinical coverage. This work is part of a larger project aiming at mapping the immunological characteristics of antivenoms generated in Latin American countries towards venoms of such poorly studied snakes of the local and neighboring countries' herpetofauna. Here we report the proteomics characterization of the Manabi hognosed pitviper Porthidium arcosae endemic to the western coastal province of Manabí (Ecuador), and the Costa Rican hognosed pitviper P. volcanicum with distribution restricted to southwestern Costa Rica, the antivenomics assessment of three bothropoid commercial antivenoms produced in Costa Rica, Perú, and Brazil against the venom components of P. arcosae, and the in vivo capacity of the Brazilian soro antibotrópico pentavalente (SAB) from Instituto Butantan to neutralize the murine lethality of P. arcosae venom. The preclinical paraspecific ED50 of 31.3 mg of P. arcosae venom per gram of antivenom points to Brazilian SAB as a promising candidate for the treatment of envenomings by the Manabi hognosed pitviper P. arcosae.

Mutual enlightenment: A toolbox of concepts and methods for integrating evolutionary and clinical toxinology via snake venomics and the contextual stance.

Snakebite envenoming is a neglected tropical disease that may claim over 100,000 human lives annually worldwide. Snakebite occurs as the result of an interaction between a human and a snake that elicits either a defensive response from the snake or, more rarely, a feeding response as the result of mistaken identity. Snakebite envenoming is therefore a biological and, more specifically, an ecological problem. Snake venom itself is often described as a "cocktail", as it is a heterogenous mixture of molecules including the toxins (which are typically proteinaceous) responsible for the pathophysiological consequences of envenoming. The primary function of venom in snake ecology is pre-subjugation, with defensive deployment of the secretion typically considered a secondary function. The particular composition of any given venom cocktail is shaped by evolutionary forces that include phylogenetic constraints associated with the snake's lineage and adaptive responses to the snake's ecological context, including the taxa it preys upon and by which it is predated upon. In the present article, we describe how conceptual frameworks from ecology and evolutionary biology can enter into a mutually enlightening relationship with clinical toxinology by enabling the consideration of snakebite envenoming from an "ecological stance". We detail the insights that may emerge from such a perspective and highlight the ways in which the high-fidelity descriptive knowledge emerging from applications of -omics era technologies - "venomics" and "antivenomics" - can combine with evolutionary explanations to deliver a detailed understanding of this multifactorial health crisis.

Morphology and seasonality of the sexual segment of the kidney in genus Bothrops snakes

In Squamata, the sexual segment of the male kidney (SSK) produces secretory granules that are transmitted to the female tract during copulation. Here, we investigate the morphology of SSK in various species of the pitviper-genus Bothrops, a medically relevant clade of Neotropical snakes, using histology, histochemistry, as well as scanning and transmission electron microscopy. We also evaluated the relationship of SSK hypertrophy with spermatogenesis and storage of sperm. The SSK in Bothrops consists of tall columnar epithelial cells filled with electron-dense secretory granules. These granules are apparently released into the lumen by an apocrine secretory process. In general, the ultrastructural morphology of SSK in Bothrops is similar to those described for other pitvipers in the genus Agkistrodon. In most Bothrops males, the SSK produces carbohydrates and proteins, and occurs in all lobes of the kidney, occupying most of the kidney mass. In contrast, intersexual females (with male copulatory organs) of Bothrops insularis had a smaller SSK diameter than males and did not show hypertrophy. The seasonal development of SSK in Bothrops species seems to be driven by environmental factors rather than phylogeny, since sister species exhibited periods of hypertrophy at different months. In most Bothrops males, hypertrophy occurs at various seasons of the year (spring, summer, autumn), even in winter, and seasonal changes in SSK do not necessarily accompany spermatogenesis.